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GWSDAT V3.1 – now released

Version 3.1 updates include:

  • Well Redundancy Analysis: This allows the user to very conveniently drop a well or a combination of wells from the analysis and investigate the resultant impact.
  • Updated User Manual: http://gwsdat.net/gwsdat_manual. A fully comprehensive description of GWSDAT, updated for version 3.1.
  • Excel Add-in Menu: New Excel menu designed to be clearer to navigate and easier to install.
  • Custom Colour Key: In response to user feedback, the latest version has the functionality to customise the colour key in the main GWSDAT spatial plot.
  • Updated branding: The Excel data input templates have been updated with more contemporary colour schemes.
  • Bug Fixes: Numerous bug fixes and enhancements. More robust data input procedures which report more thoroughly on any potential issues, e.g. missing data, incorrect units, etc.

Information about previous versions is available here.

What is GWSDAT?

GWSDAT is an open source, user-friendly, software application for the visualisation and interpretation of groundwater monitoring data. It also enables to work with other types of monitoring data collected over time and space (e.g. soil gas concentrations).

Key functionalities of tool:

  • Trend analyses
  • Data smoothing
  • Spatiotemporal smoothing
  • Determination of contamination plume characteristics
  • Well redundancy analysis
  • Automatic report generation tools based on user input.

Business Benefits

GWSDAT, through improved risk-based decision making and response, adds value in several different ways:

  • Early identification of increasing trends or off-site migration.
  • Evaluation of groundwater monitoring trends over time and space (i.e., holistic plume evaluation).
  • Nonparametric statistical and uncertainty analyses to assess highly variable groundwater data.
  • Reduction in the number of sites in long-term monitoring or active remediation through simple, visual demonstrations of groundwater data and trends.
  • More efficient evaluation and reporting of groundwater monitoring trends via simple, standardised plots and tables created at the ‘click of a mouse.’
  • Well Redundancy Analysis functionality to identify potential optimization measures with regards to monitoring well network sampling locations.

 

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Background

Introduction

The GroundWater Spatiotemporal Data Analysis Tool (GWSDAT) has been developed by Shell Global Solutions for the analysis of groundwater monitoring data. It is designed to work with simple time-series data for solute concentration and ground water elevation, but can also plot non-aqueous phase liquid (NAPL) thickness if required.

Spatial data is input in the form of well coordinates, and wells can be grouped to separate data from different aquifer units. The software also allows the import of a site basemap in GIS shapefile format. Concentration trend and 2D contour plots generated using GWSDAT can be exported directly to Microsoft PowerPoint and Word to expedite reporting.

Software Architecture

The application is supported for Windows 8 & 10 and the corresponding version of Microsoft Office (including 64-bit operating systems). Data input to GWSDAT is via a standardized Excel spreadsheet and the data analysis and plot functions are accessed through an Excel Add-in application.

The statistical engine used to perform geo-statistical modelling and display graphical output is the open- source statistical programming language R (www.r-project.org). A user manual and two example datasets are provided with the software for training and demonstration purposes.


Spatiotemporal Data Analysis

b_500__16777215_00_images_gwsdat_gwsdat-data-analysis.pngThe modelling of solute distribution in groundwater is typically restricted to either the analysis of trends in individual wells or independent fitting of spatial concentration distributions (e.g. by Kriging) to data from monitoring events. Neither of these techniques satisfactorily elucidate the interaction between spatial and temporal components of the data.

GWSDAT applies a spatiotemporal model smoother for a more coherent and smooth interpretation of the interaction in spatial and time-series components of groundwater solute concentrations. A spatiotemporal concentration smoother is fitted for each analyte using a non-parametric regression technique known as Penalised Splines (Eilers and Marx, 1992, 1996).

A Bayesian methodology is used to select the appropriate degree of model smoothness (Evers et al, 2015). The fit of the spatiotemporal algorithm to the monitoring data can be evaluated.


Graphical User Interface

b_500__16777215_00_images_gwsdat_v3.1_Claire_Pic2.pngThe GWSDAT graphical user interface (GUI) allows the user to navigate through a groundwater dataset and explore concentration/ groundwater elevation trends in individual wells and across the site.

Several options are available to customize the display and data analysis. Note that plots can also be automatically exported.

gwsdat-gui2.png


Data Visualisation

GWSDAT includes the following tools for trend visualization and detection:

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Spatial plot:
For the analysis of spatial trends in solute concentrations, groundwater flow and, if present, NAPL thickness.

Overlaid on this plot are the predictions of the spatiotemporal solute concentration smoother which is a function that simultaneously estimates both the spatial and time series trend in site solute concentrations.

GIS shapefiles can also be overlaid on this plot.

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Well Trend plot:
For the investigation of historical time-series trends in solute concentrations, groundwater elevation and, if present, NAPL thickness for individual wells.

Users can overlay a nonparametric smoother which estimates the time-series trend in solute concentration.

The advantage of this nonparametric method is that the trend estimate is not constrained to be monotonic, i.e. the trend can change direction.

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Trend and Threshold Indicator Matrix:
This feature provides a summary of the level and time series trend in solute concentrations at a particular model output interval.

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Plume diagnostics plots:
This feature enables the user to calculate and display plume diagnostic quantities (area, mass, concentration) for a delineated plume displayed with a solid red contour line.

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Well redundancy:
This feature enables the user to very conveniently drop a well or a combination of wells from the analysis and investigate the resultant impact.


Installation Instructions

System Requirements: Windows 8 or 10. Microsoft Office versions: 365, 2016, 2013, 2010.  You need to be connected to the internet when you install GWSDAT version 3.1.

  • Download and install the latest version of the open source statistical application "R" available from: http://cran.r-project.org/bin/windows/base/ . Please accept all default settings during installation. (Users must have administrator access rights to install R).
  • Download the GWSDAT_v3.10.zip file from http://gwsdat.net/gwsdat_v3-10/ and unzip to somewhere on your C: Drive which is read/writable, e.g. C:\Users\A.N.Other\GWSDAT.  
  • Open Excel and install the GWSDAT add-in by choosing: "File"> "Options" > "Add-Ins" > "Go" > "Browse" and then select "GWSDAT V3.10.xlam" located in the "C:\Users\A.N.Other\GWSDAT\GWSDAT_v3.10" folder. To avoid any Excel add-in security issues please ensure that this is a trusted location. See link here for troubleshooting Excel Add-in installation issues.
  • A menu called "GWSDAT v3.10" will appear in the EXCEL ribbon (on right side) along the top of the EXCEL window.

Getting started

  • To get started with a basic example activate menu by clicking on “GWSDAT v3.10”and then select “Open Example” > select “Basic Example" and then select "Analyse”.
  • Note- the first time you run this it may take a while as it needs to download and install some additional R packages.
  • To get started with a more complex example activate menu by clicking on “GWSDAT v3.10”and then select “Open Example” > select “Comprehensive Example”, and then select "Analyse”.


Help and Support

Please see http://gwsdat.net/gwsdat_manual/ for comprehensive user manual and supporting material.

To report any software issues or bugs please fill in the user feedback form here:  http://gwsdat.net/feedback/ .

Please note that CL:AIRE / Shell Global Solutions do not provide consultancy on data interpretation or use of the GWSDAT software.

Please click on the questions below to view the answers.

FAQs

Time series groundwater solute concentration (in ng/L, ug/L or mg/L units)

Time series groundwater elevation (relative to a common ordnance datum)

Time series NAPL thickness

Well coordinates (in Cartesian coordinates, not latitude, longitude)

Yes, scalar X,Y well coordinates can be measured direct from a site plan. For example, by aligning a transparent grid of numbered squares with the N-S arrow on the site plan (north upwards) and reading off the relative X,Y locations of each well.

Yes, site plans in GIS Shapefile format can be imported as background images. The filepath to the Shapefile folder is entered in the third table of the Excel data input worksheet (entitled “GIS ShapeFiles”). The user can either enter the shapefile location manually or use the `Browse for Shapefile' function in the GWSDAT Excel menu for interactive file selection. Only the location of the main shapefile (file ending with a `.shp' extension) needs to be specifed in this table - the associated data files (e.g. .dbf, .sbn, .sbx, .shx) will be picked up automatically, provided they are in the same folder. It is possible to overlay multiple shapefiles up to a maximum of seven. Please refer to the GWSDAT user manual for additional information, including the conversion of CAD drawing layers to Shapefile format using ARC-GIS.

No, it is not possible to model vertical concentration distribution using GWSDAT. However, it is possible to group monitoring wells (e.g. by aquifer) and then plot each group separately. Multiple concentration values for a given solute at the same X,Y location, well group and sampling time are detected by GWSDAT and averaged prior to fitting of the spatiotemporal model.

In the event that a site- wide 3D interpretation of groundwater flow and solute transport is required we would recommended the use of numerical modelling software such as FEFLOW or MODFLOW. The considerable time and effort required to populate and run such complex models may be justified for high profile sites when working with high- cost 3 dimensional aquifer data.

The minimum input data requirements for GWSDAT to run correctly are as follows: For plotting of groundwater flow direction arrows:

  • No solute concentration data required
  • Minimum 3 well locations in coordinate table
  • Minimum 1 measurement of groundwater elevation at each of these 3 wells within the user- selected model output interval

For plotting of groundwater elevation contours:

  • No solute concentration data required
  • Minimum 4 well locations in coordinate table
  • Minimum 1 measurement of groundwater elevation at each of these 4 well locations within the user- selected model output interval

For plotting of solute concentration trends at individual wells:

  • Minimum one solute: No groundwater elevation data required
  • Minimum 1 well location in coordinate table
  • Minimum 1 measurement of groundwater solute concentration at this well location

For fitting of valid spatiotemporal model and plotting of solute concentration contours:

  • Minimum one solute: No groundwater elevation data required
  • Minimum 3 well locations in coordinate table
  • Minimum 2 concentration, time data points for each of these 3 well coordinates

In order to generate representative concentration contour plots, the spacing of monitoring wells needs to reflect the characteristic distance over which solute concentrations vary in the groundwater. This will vary from site to site: if groundwater flow rates are low or solute transport retarded then concentration hotspots are likely to occur and a closer well spacing will be required to map the concentration distribution. Conversely, if groundwater flow rates are high and solute transport is not significantly retarded then a larger well spacing may be adequate to map the concentration distribution.

Because the minimum well spacing required for effective concentration contouring varies from site to site, the user’s judgement is required in deciding whether the available data merits contouring. The presence of “redundant” data points that can be removed without significantly changing the concentration distribution is an indication that the monitoring well spacing is more than sufficient.

In the event that only a small number of wells (i.e. <4) are present, then GWSDAT v2.0 includes a circle plot option, which represents the data as circles coloured and sized to solute concentration, thereby avoiding the need to use potentially misleading concentration contours.

Similar arguments apply to the contouring of groundwater elevation data, although in the absence of significant topographic variation/ geological heterogeneity or groundwater abstraction/ water injection groundwater piezometric surfaces should be locally planar. The adaptive kriging algorithm used by GWSDAT to derive the piezometric surface requires a minimum of 4 well locations; flow direction arrows can, however, be generated for only 3 well locations.

GWSDAT handles non-detect data by a method of substitution. In accordance with general convention, the default option is to substitute the non-detect data with half its detection limit, e.g. ND<50ug/l is substituted with 25ug/l. Alternatively, non-detect data can be substituted with its full detection limit, e.g. ND<50ug/l is substituted with 50ug/l. Note that the entry of zero concentration values is not permitted.

During data analysis the user has the option to ignore the presence of NAPL when fitting the spatiotemporal model, or substitute detections of NAPL with site maximum solute concentrations. NAPL substitution should only be used if it is known that the solutes entered into GWSDAT are derived from dissolution of the NAPL. This functionality was introduced to avoid the situation whereby an area of wells containing NAPL appears as a minimum on concentration contour plots because groundwater solute concentration data is not available.

Note: Any solutes that are not derived from the NAPL can be excluded from the NAPL substitution process by flagging them as “NotInNAPL” or “E-acc” in the historical monitoring data table of the input worksheet. Note also that only one solute data point needs to be flagged to remove that solute from the substitution algorithm.

 

 

Further details on GWSDAT at www.gwsdat.net


Useful Links and Presentations

GWSDAT is listed in the following ITRC guidance document: Groundwater statistics for Monitoring and Compliance

Case studies: http://gwsdat.net/case-studies/

Article: on benefits of spatiotemporal modelling GWSDAT in Science of Total Environment.

Article: on GWSDAT in Science Direct

Article: "Analyzing Groundwater Quality Data and Contamination Plumes with GWSDAT" in Groundwater

Paper: "Efficient and automatic methods for flexible regression on spatiotemporal data, with applications to groundwater monitoring" in Environmetrics

Supporting information for the above Groundwater article:

 


Acknowledgements

The authors gratefully acknowledge those people who have contributed their knowledge and time to the development of GWSDAT.

The authors wish to express their gratitude to Adrian Bowman, Ludger Evers and Daniel Molinari from the department of Statistics, University of Glasgow, for their invaluable contributions to the development of the spatiotemporal algorithm.

Thanks also to Ewan Mercer from the University of Glasgow for his assistance in the development of the GWSDAT user interface.

We acknowledge and thank the R project for Statistical Computing and all its contributors without which this project would not have been possible.

A big thank you to Shell's worldwide environmental consultants for assistance in evaluating and testing the earlier versions of GWSDAT.

Thanks also to the Shell Year in Industry students who spent a great deal of time testing GWSDAT and making suggestions for improvements.

We thank both current and former colleagues including Matthew Lahvis, Jonathan Smith, George Devaull, Dan Walsh, Curtis Stanley, Marco Giannitrapani and Philip Jonathan for their support, vision and advocacy of GWSDAT.

References